Anaconda
Python 2.7 and 3.7 with 195 popular packages
Introduction
Anaconda Python is a Python distribution for large-scale data processing and scientific computing provided by Continuum Analytics. It contains 195+ popular python packages for science, math, engineering, data analysis.
Using Anaconda on RCC Resources
To use Anaconda Python 2.7, simply load the corresponding module as follows:
module load anaconda2.7.15
and for Anaconda Python 3.7:
module load anaconda3.7.3
You can check if it is running the anaconda python by
$ which python
# Should return either:
/gpfs/research/software/python/anaconda2/bin/python
# or
/gpfs/research/software/python/anaconda37/bin/python
To start a python session on a compute node, simply type
$ python
To start an ipython (interactive python) session for either version, type
(base) [bchen3@h22-login-26 ~]$ module load anaconda3.7.3
(base) [bchen3@h22-login-26 ~]$ ipython
Python 3.7.3 (default, Mar 27 2019, 22:11:17)
Type 'copyright', 'credits' or 'license' for more information
IPython 7.6.1 -- An enhanced Interactive Python. Type '?' for help.
In [1]:
Available Packages on RCC Systems
Some important python packages included are listed below:
| Package | Version | Available in anaconda2.7.15 | Available in anaconda3.7.3 |
|---|---|---|---|
| alabaster | 0.7.10 | Yes | No |
| anaconda-client | 1.6.14 | Yes | Yes |
| anaconda-navigator | 1.8.7 | Yes | Yes |
| anaconda-project | 0.8.2 | Yes | Yes |
| asn1crypto | 0.24.0 | Yes | Yes |
| astor | 0.7.1 | Yes | No |
| astroid | 1.6.3 | Yes | Yes |
| astropy | 2.0.6 | Yes | Yes |
| attrs | 18.1.0 | Yes | Yes |
| Babel | 2.5.3 | Yes | Yes |
| backcall | 0.1.0 | No | Yes |
| backports-abc | 0.5 | Yes | No |
| backports.functools-lru-cache | 1.5 | Yes | No |
| backports.shutil-get-terminal-size | 1.0.0 | Yes | Yes |
| backports.ssl-match-hostname | 3.5.0.1 | Yes | No |
| backports.weakref | 1.0.post1 | Yes | No |
| beautifulsoup4 | 4.6.0 | Yes | Yes |
| bitarray | 0.8.1 | Yes | Yes |
| bkcharts | 0.2 | Yes | Yes |
| blaze | 0.11.3 | Yes | Yes |
| bleach | 2.1.3 | Yes | Yes |
| bokeh | 0.12.16 | Yes | Yes |
| boto | 2.48.0 | Yes | Yes |
| Bottleneck | 1.2.1 | Yes | Yes |
| cdecimal | 2.3 | Yes | No |
| certifi | 2018.4.16 | Yes | Yes |
| cffi | 1.11.5 | Yes | Yes |
| chardet | 3.0.4 | Yes | Yes |
| click | 6.7 | Yes | Yes |
| cloudpickle | 0.5.3 | Yes | Yes |
| clyent | 1.2.2 | Yes | Yes |
| colorama | 0.3.9 | Yes | Yes |
| conda | 4.5.11 | Yes | Yes |
| conda-build | 3.10.5 | Yes | Yes |
| conda-verify | 2.0.0 | Yes | Yes |
| configparser | 3.5.0 | Yes | No |
| contextlib2 | 0.5.5 | Yes | Yes |
| cryptography | 2.2.2 | Yes | Yes |
| cycler | 0.10.0 | Yes | Yes |
| Cython | 0.28.2 | Yes | Yes |
| cytoolz | 0.9.0.1 | Yes | Yes |
| dask | 0.17.5 | Yes | Yes |
| datashape | 0.5.4 | Yes | Yes |
| decorator | 4.3.0 | Yes | Yes |
| distributed | 1.21.8 | Yes | Yes |
| docutils | 0.14 | Yes | Yes |
| entrypoints | 0.2.3 | Yes | Yes |
| enum34 | 1.1.6 | Yes | No |
| et-xmlfile | 1.0.1 | Yes | Yes |
| fastcache | 1.0.2 | Yes | Yes |
| filelock | 3.0.4 | Yes | Yes |
| Flask | 1.0.2 | Yes | Yes |
| Flask-Cors | 3.0.4 | Yes | Yes |
| funcsigs | 1.0.2 | Yes | No |
| functools32 | 3.2.3.post2 | Yes | No |
| futures | 3.2.0 | Yes | No |
| gast | 0.2.0 | Yes | No |
| gevent | 1.3.0 | Yes | Yes |
| glob2 | 0.6 | Yes | Yes |
| gmpy2 | 2.0.8 | Yes | Yes |
| greenlet | 0.4.13 | Yes | Yes |
| grin | 1.2.1 | Yes | No |
| grpcio | 1.12.1 | Yes | No |
| h5py | 2.7.1 | Yes | Yes |
| heapdict | 1.0.0 | Yes | Yes |
| html5lib | 1.0.1 | Yes | Yes |
| idna | 2.6 | Yes | Yes |
| imageio | 2.3.0 | Yes | Yes |
| imagesize | 1.0.0 | Yes | Yes |
| ipaddress | 1.0.22 | Yes | No |
| ipykernel | 4.8.2 | Yes | Yes |
| ipython | 5.7.0 | Yes | Yes |
| ipython-genutils | 0.2.0 | Yes | Yes |
| ipywidgets | 7.2.1 | Yes | Yes |
| isort | 4.3.4 | Yes | Yes |
| itsdangerous | 0.24 | Yes | Yes |
| jdcal | 1.4 | Yes | Yes |
| jedi | 0.12.0 | Yes | Yes |
| Jinja2 | 2.10 | Yes | Yes |
| jsonschema | 2.6.0 | Yes | Yes |
| jupyter | 1.0.0 | Yes | Yes |
| jupyter-client | 5.2.3 | Yes | Yes |
| jupyter-console | 5.2.0 | Yes | Yes |
| jupyter-core | 4.4.0 | Yes | Yes |
| jupyterlab | 0.32.1 | Yes | Yes |
| jupyterlab-launcher | 0.10.5 | Yes | Yes |
| Keras | 2.2.2 | Yes | No |
| Keras-Applications | 1.0.4 | Yes | No |
| Keras-Preprocessing | 1.0.2 | Yes | No |
| kiwisolver | 1.0.1 | Yes | Yes |
| lazy-object-proxy | 1.3.1 | Yes | Yes |
| llvmlite | 0.23.1 | Yes | Yes |
| locket | 0.2.0 | Yes | Yes |
| lxml | 4.2.1 | Yes | Yes |
| Markdown | 2.6.11 | Yes | No |
| MarkupSafe | 1.0 | Yes | Yes |
| matplotlib | 2.2.2 | Yes | Yes |
| mccabe | 0.6.1 | Yes | Yes |
| mistune | 0.8.3 | Yes | Yes |
| mkl-fft | 1.0.0 | Yes | Yes |
| mkl-random | 1.0.1 | Yes | Yes |
| mock | 2.0.0 | Yes | No |
| more-itertools | 4.1.0 | Yes | Yes |
| mpmath | 1.0.0 | Yes | Yes |
| msgpack-python | 0.5.6 | Yes | Yes |
| multipledispatch | 0.5.0 | Yes | Yes |
| navigator-updater | 0.2.1 | Yes | Yes |
| nbconvert | 5.3.1 | Yes | Yes |
| nbformat | 4.4.0 | Yes | Yes |
| networkx | 2.1 | Yes | Yes |
| nltk | 3.3 | Yes | Yes |
| nose | 1.3.7 | Yes | Yes |
| notebook | 5.5.0 | Yes | Yes |
| numba | 0.38.0+0.g2a2b772fc.dirty | Yes | Yes |
| numexpr | 2.6.5 | Yes | Yes |
| numpy | 1.14.3 | Yes | Yes |
| numpydoc | 0.8.0 | Yes | Yes |
| odo | 0.5.1 | Yes | Yes |
| olefile | 0.45.1 | Yes | Yes |
| openpyxl | 2.5.3 | Yes | Yes |
| packaging | 17.1 | Yes | Yes |
| pandas | 0.23.0 | Yes | Yes |
| pandocfilters | 1.4.2 | Yes | Yes |
| parso | 0.2.0 | Yes | Yes |
| partd | 0.3.8 | Yes | Yes |
| path.py | 11.0.1 | Yes | Yes |
| pathlib2 | 2.3.2 | Yes | Yes |
| patsy | 0.5.0 | Yes | Yes |
| pbr | 4.2.0 | Yes | No |
| pep8 | 1.7.1 | Yes | Yes |
| pexpect | 4.5.0 | Yes | Yes |
| pickleshare | 0.7.4 | Yes | Yes |
| Pillow | 5.1.0 | Yes | Yes |
| pkginfo | 1.4.2 | Yes | Yes |
| pluggy | 0.6.0 | Yes | Yes |
| ply | 3.11 | Yes | Yes |
| prompt-toolkit | 1.0.15 | Yes | Yes |
| protobuf | 3.6.0 | Yes | No |
| psutil | 5.4.5 | Yes | Yes |
| ptyprocess | 0.5.2 | Yes | Yes |
| py | 1.5.3 | Yes | Yes |
| pycairo | 1.15.4 | Yes | No |
| pycodestyle | 2.4.0 | Yes | Yes |
| pycosat | 0.6.3 | Yes | Yes |
| pycparser | 2.18 | Yes | Yes |
| pycrypto | 2.6.1 | Yes | Yes |
| pycurl | 7.43.0.1 | Yes | Yes |
| pyflakes | 1.6.0 | Yes | Yes |
| Pygments | 2.2.0 | Yes | Yes |
| pylint | 1.8.4 | Yes | Yes |
| pyodbc | 4.0.23 | Yes | Yes |
| pyOpenSSL | 18.0.0 | Yes | Yes |
| pyparsing | 2.2.0 | Yes | Yes |
| PySocks | 1.6.8 | Yes | Yes |
| pytest | 3.5.1 | Yes | Yes |
| pytest-arraydiff | 0.2 | No | Yes |
| pytest-astropy | 0.3.0 | No | Yes |
| pytest-doctestplus | 0.1.3 | No | Yes |
| pytest-openfiles | 0.3.0 | No | Yes |
| pytest-remotedata | 0.2.1 | No | Yes |
| python-dateutil | 2.7.3 | Yes | Yes |
| pytz | 2018.4 | Yes | Yes |
| PyWavelets | 0.5.2 | Yes | Yes |
| PyYAML | 3.12 | Yes | Yes |
| pyzmq | 17.0.0 | Yes | Yes |
| QtAwesome | 0.4.4 | Yes | Yes |
| qtconsole | 4.3.1 | Yes | Yes |
| QtPy | 1.4.1 | Yes | Yes |
| requests | 2.18.4 | Yes | Yes |
| rope | 0.10.7 | Yes | Yes |
| ruamel-yaml | 0.15.35 | Yes | Yes |
| scandir | 1.7 | Yes | No |
| scikit-image | 0.13.1 | Yes | Yes |
| scikit-learn | 0.19.1 | Yes | Yes |
| scipy | 1.1.0 | Yes | Yes |
| seaborn | 0.8.1 | Yes | Yes |
| Send2Trash | 1.5.0 | Yes | Yes |
| simplegeneric | 0.8.1 | Yes | Yes |
| singledispatch | 3.4.0.3 | Yes | Yes |
| six | 1.11.0 | Yes | Yes |
| snowballstemmer | 1.2.1 | Yes | Yes |
| sortedcollections | 0.6.1 | Yes | Yes |
| sortedcontainers | 1.5.10 | Yes | Yes |
| Sphinx | 1.7.4 | Yes | Yes |
| sphinxcontrib-websupport | 1.0.1 | Yes | Yes |
| spyder | 3.2.8 | Yes | Yes |
| SQLAlchemy | 1.2.7 | Yes | Yes |
| statsmodels | 0.9.0 | Yes | Yes |
| subprocess32 | 3.5.0 | Yes | No |
| sympy | 1.1.1 | Yes | Yes |
| tables | 3.4.3 | Yes | Yes |
| tblib | 1.3.2 | Yes | Yes |
| tensorboard | 1.9.0 | Yes | No |
| tensorflow | 1.9.0 | Yes | No |
| termcolor | 1.1.0 | Yes | No |
| terminado | 0.8.1 | Yes | Yes |
| testpath | 0.3.1 | Yes | Yes |
| toolz | 0.9.0 | Yes | Yes |
| torch | 0.4.1.post2 | Yes | Yes |
| tornado | 5.0.2 | Yes | Yes |
| traitlets | 4.3.2 | Yes | Yes |
| typing | 3.6.4 | Yes | Yes |
| ujson | 1.35 | Yes | No |
| unicodecsv | 0.14.1 | Yes | Yes |
| urllib3 | 1.22 | Yes | Yes |
| vpnotebook | 0.1.3 | Yes | No |
| vpython | 7.4.6 | Yes | No |
| wcwidth | 0.1.7 | Yes | Yes |
| webencodings | 0.5.1 | Yes | Yes |
| Werkzeug | 0.14.1 | Yes | Yes |
| widgetsnbextension | 3.2.1 | Yes | Yes |
| wrapt | 1.10.11 | Yes | Yes |
| xlrd | 1.1.0 | Yes | Yes |
| XlsxWriter | 1.0.4 | Yes | Yes |
| xlwt | 1.3.0 | Yes | Yes |
| zict | 0.1.3 | Yes | Yes |
A more comprehensive list can be found from Packages.
If you need to install other python packages for your research, please contact us through support@rcc.fsu.edu.